Upload folder using huggingface_hub
Browse files- .gitattributes +1 -0
- Images.zip +3 -0
- OpenMMMedical.tsv +3 -0
- README.md +156 -1
- baichuan.py +178 -0
- image_mcq.py +1082 -0
.gitattributes
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# Video files - compressed
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*.mp4 filter=lfs diff=lfs merge=lfs -text
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*.webm filter=lfs diff=lfs merge=lfs -text
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OpenMMMedical.tsv filter=lfs diff=lfs merge=lfs -text
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OpenMMMedical.tsv
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README.md
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@@ -1,3 +1,158 @@
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| 1 |
---
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| 2 |
-
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| 3 |
---
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| 1 |
+
# OpenMM-Medical
|
| 2 |
+
|
| 3 |
+
## Introduction
|
| 4 |
+
|
| 5 |
+
OpenMM-Medical is a comprehensive large-scale medical evaluation dataset that spans multiple domains, including Magnetic Resonance Imaging (MRI), CT scans, X-rays, microscopy images, endoscopy, fundus imaging, and dermoscopy.
|
| 6 |
+
OpenMM-Medical is an integration of existing datasets, comprising a total of 88,996 entries. It is designed to advance the development of multimodal medical large language models within the research community.
|
| 7 |
+
|
| 8 |
+
Components | Content | Type | Number | Metrics
|
| 9 |
+
| :----: | :----: |:----: | :----: |:----: |
|
| 10 |
+
ACRIMA | Fundus Photography | Multiple Choice Question Answering | 159 | Acc
|
| 11 |
+
Adam Challenge | Endoscopy | Multiple Choice Question Answering | 87 | Acc
|
| 12 |
+
ALL Challenge | Microscopy Images | Multiple Choice Question Answering | 342 | Acc
|
| 13 |
+
BioMediTech | Microscopy Images | Multiple Choice Question Answering | 511 | Acc
|
| 14 |
+
Blood Cell | Microscopy Images | Multiple Choice Question Answering | 1175 | Acc
|
| 15 |
+
BreakHis | Magnetic Resonance Imaging | Multiple Choice Question Answering | 735 | Acc
|
| 16 |
+
Chest CT Scan | CT Imaging | Multiple Choice Question Answering | 871 | Acc
|
| 17 |
+
Chest X-Ray PA | X-Ray | Multiple Choice Question Answering | 850 | Acc
|
| 18 |
+
CoronaHack | X-Ray | Multiple Choice Question Answering | 684 | Acc
|
| 19 |
+
Covid CT | CT Imaging | Multiple Choice Question Answering | 199 | Acc
|
| 20 |
+
Covid-19 tianchi | X-Ray | Multiple Choice Question Answering | 96 | Acc
|
| 21 |
+
Covid19 heywhale | X-Ray | Multiple Choice Question Answering | 690 | Acc
|
| 22 |
+
COVIDx CXR-4 | X-Ray | Multiple Choice Question Answering | 485 | Acc
|
| 23 |
+
CRC100k | Magnetic Resonance Imaging | Multiple Choice Question Answering | 1322 | Acc
|
| 24 |
+
DeepDRiD | Fundus Photography | Multiple Choice Question Answering | 131 | Acc
|
| 25 |
+
Diabetic Retinopathy | Fundus Photography | Multiple Choice Question Answering | 2051 | Acc
|
| 26 |
+
DRIMDB | Fundus Photography | Multiple Choice Question Answering | 132 | Acc
|
| 27 |
+
Fitzpatrick 17k | Dermoscopy | Multiple Choice Question Answering | 1552 | Acc
|
| 28 |
+
HuSHeM | Microscopy Images | Multiple Choice Question Answering | 89 | Acc
|
| 29 |
+
ISBI2016 | Dermoscopy | Multiple Choice Question Answering | 681 | Acc
|
| 30 |
+
ISIC2018 | Dermoscopy | Multiple Choice Question Answering | 272 | Acc
|
| 31 |
+
ISIC2019 | Dermoscopy | Multiple Choice Question Answering | 1952 | Acc
|
| 32 |
+
ISIC2020 | Dermoscopy | Multiple Choice Question Answering | 1580 | Acc
|
| 33 |
+
JSIEC | Fundus Photography | Multiple Choice Question Answering | 220 | Acc
|
| 34 |
+
Knee Osteoarthritis | X-Ray | Multiple Choice Question Answering | 518 | Acc
|
| 35 |
+
MAlig Lymph | Magnetic Resonance Imaging | Multiple Choice Question Answering | 149 | Acc
|
| 36 |
+
MHSMA | Microscopy Images | Multiple Choice Question Answering | 1282 | Acc
|
| 37 |
+
MIAS | X-Ray | Multiple Choice Question Answering | 142 | Acc
|
| 38 |
+
Monkeypox Skin Image 2022 | Dermoscopy | Multiple Choice Question Answering | 163 | Acc
|
| 39 |
+
Mura | X-Ray | Multiple Choice Question Answering | 1464 | Acc
|
| 40 |
+
NLM- Malaria Data | Magnetic Resonance Imaging | Multiple Choice Question Answering | 75 | Acc
|
| 41 |
+
OCT & X-Ray 2017 | X-Ray, Optical Coherence Tomography | Multiple Choice Question Answering | 1301 | Acc
|
| 42 |
+
OLIVES | Fundus Photography | Multiple Choice Question Answering | 593 | Acc
|
| 43 |
+
PAD-UFES-20 | Dermoscopy | Multiple Choice Question Answering | 479 | Acc
|
| 44 |
+
PALM2019 | Fundus Photography | Multiple Choice Question Answering | 510 | Acc
|
| 45 |
+
Pulmonary Chest MC | X-Ray | Multiple Choice Question Answering | 38 | Acc
|
| 46 |
+
Pulmonary Chest Shenzhen | X-Ray | Multiple Choice Question Answering | 296 | Acc
|
| 47 |
+
RadImageNet | CT; Magnetic Resonance Imaging; Ultrasound | Multiple Choice Question Answering | 56697 | Acc
|
| 48 |
+
Retinal OCT-C8 | Optical Coherence Tomography | Multiple Choice Question Answering | 4016 | Acc
|
| 49 |
+
RUS CHN | X-Ray | Multiple Choice Question Answering | 1982 | Acc
|
| 50 |
+
SARS-CoV-2 CT-scan | CT | Multiple Choice Question Answering | 910 | Acc
|
| 51 |
+
Yangxi | Fundus Photography | Multiple Choice Question Answering | 1515 | Acc
|
| 52 |
+
|
| 53 |
+
## Usage
|
| 54 |
+
|
| 55 |
+
The following steps detail how to use [**Baichuan-Omni-1.5**](https://github.com/baichuan-inc/Baichuan-Omni-1.5) with OpenMM-Medical for evaluation using [**VLMEvalKit**](https://github.com/open-compass/VLMEvalKit):
|
| 56 |
+
|
| 57 |
---
|
| 58 |
+
|
| 59 |
+
### **1. Add `baichuan.py` in `VLMEvalKit/vlmeval/vlm`**
|
| 60 |
+
|
| 61 |
+
Download `baichuan.py` (which defines the `Baichuan` model class) and add it in `VLMEvalKit/vlmeval/vlm`.
|
| 62 |
+
|
| 63 |
---
|
| 64 |
+
|
| 65 |
+
### **2. Modify `VLMEvalKit/vlmeval/vlm/__init__.py`**
|
| 66 |
+
Add the following line:
|
| 67 |
+
```python
|
| 68 |
+
from .baichuan import Baichuan
|
| 69 |
+
```
|
| 70 |
+
|
| 71 |
+
---
|
| 72 |
+
|
| 73 |
+
### **3. Modify `VLMEvalKit/vlmeval/config.py`**
|
| 74 |
+
Import the `Baichuan` model:
|
| 75 |
+
```python
|
| 76 |
+
from vlmeval.vlm import Baichuan
|
| 77 |
+
```
|
| 78 |
+
|
| 79 |
+
Add the `Baichuan-omni` model configuration:
|
| 80 |
+
```python
|
| 81 |
+
'Baichuan-omni': partial(
|
| 82 |
+
Baichuan,
|
| 83 |
+
sft=True,
|
| 84 |
+
model_path='/your/path/to/the/model/checkpoint'
|
| 85 |
+
)
|
| 86 |
+
```
|
| 87 |
+
|
| 88 |
+
---
|
| 89 |
+
|
| 90 |
+
### **4. Modify `VLMEvalKit/vlmeval/dataset/image_mcq.py`**
|
| 91 |
+
Download `image_mcq.py` and add the following code to define the `OpenMMMedical` class. Ensure the `image_folder` points to your OpenMM-Medical dataset location:
|
| 92 |
+
|
| 93 |
+
```python
|
| 94 |
+
class OpenMMMedical(ImageMCQDataset):
|
| 95 |
+
|
| 96 |
+
@classmethod
|
| 97 |
+
def supported_datasets(cls):
|
| 98 |
+
return ['OpenMMMedical']
|
| 99 |
+
|
| 100 |
+
def load_data(self, dataset='OpenMMMedical'):
|
| 101 |
+
image_folder = "/your/path/to/OpenMM_Medical"
|
| 102 |
+
def generate_tsv(pth):
|
| 103 |
+
import csv
|
| 104 |
+
from pathlib import Path
|
| 105 |
+
tsv_file_path = os.path.join(LMUDataRoot(), f'{dataset}.tsv')
|
| 106 |
+
...
|
| 107 |
+
```
|
| 108 |
+
|
| 109 |
+
---
|
| 110 |
+
|
| 111 |
+
### **5. Update `VLMEvalKit/vlmeval/dataset/__init__.py`**
|
| 112 |
+
Import `OpenMMMedical`:
|
| 113 |
+
```python
|
| 114 |
+
from .image_mcq import (
|
| 115 |
+
ImageMCQDataset, MMMUDataset, CustomMCQDataset,
|
| 116 |
+
MUIRDataset, GMAIMMBenchDataset, MMERealWorld, OpenMMMedical
|
| 117 |
+
)
|
| 118 |
+
|
| 119 |
+
IMAGE_DATASET = [
|
| 120 |
+
ImageCaptionDataset, ImageYORNDataset, ImageMCQDataset, ImageVQADataset,
|
| 121 |
+
MathVision, MMMUDataset, OCRBench, MathVista, LLaVABench, MMVet,
|
| 122 |
+
MTVQADataset, TableVQABench, MMLongBench, VCRDataset, MMDUDataset,
|
| 123 |
+
DUDE, SlideVQA, MUIRDataset, GMAIMMBenchDataset, MMERealWorld, OpenMMMedical
|
| 124 |
+
]
|
| 125 |
+
```
|
| 126 |
+
|
| 127 |
+
---
|
| 128 |
+
|
| 129 |
+
### **6. Update `VLMEvalKit/vlmeval/dataset/image_base.py`**
|
| 130 |
+
Modify the `img_root_map` function:
|
| 131 |
+
```python
|
| 132 |
+
def img_root_map(dataset):
|
| 133 |
+
if 'OpenMMMedical' in dataset:
|
| 134 |
+
return 'OpenMMMedical'
|
| 135 |
+
if 'OCRVQA' in dataset:
|
| 136 |
+
return 'OCRVQA'
|
| 137 |
+
if 'COCO_VAL' == dataset:
|
| 138 |
+
return 'COCO'
|
| 139 |
+
if 'MMMU' in dataset:
|
| 140 |
+
return 'MMMU'
|
| 141 |
+
```
|
| 142 |
+
|
| 143 |
+
---
|
| 144 |
+
|
| 145 |
+
### **7. Run the Evaluation**
|
| 146 |
+
Execute the following command to start the evaluation:
|
| 147 |
+
```bash
|
| 148 |
+
python run.py --data OpenMMMedical --model Baichuan-omni --verbose
|
| 149 |
+
```
|
| 150 |
+
|
| 151 |
+
---
|
| 152 |
+
|
| 153 |
+
### **Notes:**
|
| 154 |
+
- Ensure that all paths (e.g., `/your/path/to/OpenMM_Medical`) are correctly specified.
|
| 155 |
+
- Confirm that the Baichuan model checkpoint is accessible at the defined `model_path`.
|
| 156 |
+
- Validate the dependencies and configurations of VLMEvalKit to avoid runtime issues.
|
| 157 |
+
|
| 158 |
+
With this setup, you should be able to evaluate OpenMM-Medical using Baichuan-Omni successfully.
|
baichuan.py
ADDED
|
@@ -0,0 +1,178 @@
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|
| 1 |
+
import os
|
| 2 |
+
|
| 3 |
+
from .base import BaseModel
|
| 4 |
+
from ..smp import *
|
| 5 |
+
from ..dataset import DATASET_TYPE
|
| 6 |
+
from transformers import AutoModelForCausalLM, AutoTokenizer, GenerationConfig
|
| 7 |
+
import torch
|
| 8 |
+
import json
|
| 9 |
+
|
| 10 |
+
os.environ["TOKENIZERS_PARALLELISM"] = "false"
|
| 11 |
+
|
| 12 |
+
|
| 13 |
+
def load_model_tokenizer(checkpoint_path):
|
| 14 |
+
tokenizer = AutoTokenizer.from_pretrained(
|
| 15 |
+
checkpoint_path, trust_remote_code=True,
|
| 16 |
+
)
|
| 17 |
+
device_map = 'auto'
|
| 18 |
+
model = AutoModelForCausalLM.from_pretrained(
|
| 19 |
+
checkpoint_path,
|
| 20 |
+
device_map=device_map,
|
| 21 |
+
trust_remote_code=True,
|
| 22 |
+
torch_dtype=torch.bfloat16,
|
| 23 |
+
)
|
| 24 |
+
return model, tokenizer
|
| 25 |
+
|
| 26 |
+
|
| 27 |
+
class Baichuan(BaseModel):
|
| 28 |
+
INSTALL_REQ = False
|
| 29 |
+
INTERLEAVE = False
|
| 30 |
+
|
| 31 |
+
def __init__(self, sft=True, model_path=None):
|
| 32 |
+
assert model_path is not None
|
| 33 |
+
self.device = "cuda"
|
| 34 |
+
self.model_path = model_path
|
| 35 |
+
|
| 36 |
+
self.model, self.tokenizer = load_model_tokenizer(model_path)
|
| 37 |
+
self.model.bind_processor(self.tokenizer, training=False)
|
| 38 |
+
|
| 39 |
+
torch.cuda.empty_cache()
|
| 40 |
+
|
| 41 |
+
self.use_reserve_qa_prompt = sft
|
| 42 |
+
self.reserve_qa_start_prompt = "<C_Q>"
|
| 43 |
+
self.reserve_qa_end_prompt = "<C_A>"
|
| 44 |
+
|
| 45 |
+
self.task_prompt=""
|
| 46 |
+
self.options_system_prompt = ('Carefully read the following question and select the letter corresponding '
|
| 47 |
+
'to the correct answer. Highlight the applicable choices without giving '
|
| 48 |
+
'explanations. ')
|
| 49 |
+
self.wo_options_system_prompt = 'Carefully read the following question Answer the question directly. '
|
| 50 |
+
self.detail_system_prompt = 'Answer this question in detail and step by step. '
|
| 51 |
+
self.vqa_prompt = 'Answer the question using a single word or phrase. '
|
| 52 |
+
|
| 53 |
+
|
| 54 |
+
def generate_inner(self, message, dataset=None):
|
| 55 |
+
image_str, question = '', ''
|
| 56 |
+
for s in message:
|
| 57 |
+
if s['type'] == 'image':
|
| 58 |
+
if len(s["value"].split(".")[-1]) > 2:
|
| 59 |
+
image_dict = {"local": s["value"]}
|
| 60 |
+
else:
|
| 61 |
+
image_dict = {"base64": s["value"]}
|
| 62 |
+
image_str += f"<img_start_baichuan>{json.dumps(image_dict)}<img_end_baichuan>\n"
|
| 63 |
+
elif s['type'] == 'text':
|
| 64 |
+
question += s['value']
|
| 65 |
+
|
| 66 |
+
# sft version: <C_Q>...<C_A>
|
| 67 |
+
if self.use_reserve_qa_prompt:
|
| 68 |
+
prompt = "{}{}{}{}{}".format(self.reserve_qa_start_prompt, image_str, question, self.task_prompt, self.reserve_qa_end_prompt)
|
| 69 |
+
else:
|
| 70 |
+
prompt = "{}{}{}".format(image_str, question, self.task_prompt)
|
| 71 |
+
|
| 72 |
+
print("****************************** prompt ******************************")
|
| 73 |
+
print(prompt)
|
| 74 |
+
print("********************************************************************")
|
| 75 |
+
|
| 76 |
+
with torch.inference_mode():
|
| 77 |
+
ret = self.model.processor(prompt)
|
| 78 |
+
input_ids = ret.input_ids
|
| 79 |
+
try:
|
| 80 |
+
ret = self.model.generate(
|
| 81 |
+
inputs=torch.LongTensor([input_ids]).cuda(),
|
| 82 |
+
images=[torch.tensor(img, dtype=torch.float32).cuda() for img in images] if ret.images is not None else None,
|
| 83 |
+
patch_nums=ret.patch_nums,
|
| 84 |
+
images_grid=ret.images_grid,
|
| 85 |
+
max_new_tokens=1024, do_sample=False, top_k=5, top_p=0.85, temperature=0,
|
| 86 |
+
num_return_sequences=1, repetition_penalty=1.05,
|
| 87 |
+
use_cache=False
|
| 88 |
+
)
|
| 89 |
+
ret = self.tokenizer.batch_decode(ret[:, torch.LongTensor([input_ids]).to(self.device).shape[1]:], skip_special_tokens=True)[0].strip()
|
| 90 |
+
except Exception as e:
|
| 91 |
+
print(e)
|
| 92 |
+
ret = ""
|
| 93 |
+
|
| 94 |
+
response = ret
|
| 95 |
+
|
| 96 |
+
print("=========================================== response ===========================================")
|
| 97 |
+
print(f"\033[32m{response}\033[0m")
|
| 98 |
+
print("================================================================================================")
|
| 99 |
+
return response
|
| 100 |
+
|
| 101 |
+
|
| 102 |
+
def use_custom_prompt(self, dataset):
|
| 103 |
+
if dataset is not None and listinstr(['M3GIA'], dataset):
|
| 104 |
+
return False
|
| 105 |
+
if listinstr(['MCQ', 'VQA'], DATASET_TYPE(dataset)):
|
| 106 |
+
return True
|
| 107 |
+
elif dataset is not None and listinstr(['HallusionBench'], dataset):
|
| 108 |
+
return True
|
| 109 |
+
return False
|
| 110 |
+
|
| 111 |
+
|
| 112 |
+
def build_prompt(self, line, dataset=None):
|
| 113 |
+
if isinstance(line, int):
|
| 114 |
+
line = self.data.iloc[line]
|
| 115 |
+
|
| 116 |
+
tgt_path = self.dump_image(line, dataset)
|
| 117 |
+
system_prompt = ''
|
| 118 |
+
|
| 119 |
+
question = line['question']
|
| 120 |
+
if DATASET_TYPE(dataset) == 'MCQ':
|
| 121 |
+
options = {
|
| 122 |
+
cand: line[cand]
|
| 123 |
+
for cand in string.ascii_uppercase
|
| 124 |
+
if cand in line and not pd.isna(line[cand])
|
| 125 |
+
}
|
| 126 |
+
options_prompt = 'Options:\n'
|
| 127 |
+
for key, item in options.items():
|
| 128 |
+
options_prompt += f'{key}. {item}\n'
|
| 129 |
+
hint = line['hint'] if ('hint' in line and not pd.isna(line['hint'])) else None
|
| 130 |
+
prompt = ''
|
| 131 |
+
if hint is not None:
|
| 132 |
+
prompt += f'Hint: {hint}\n'
|
| 133 |
+
prompt += f'Question: {question}\n'
|
| 134 |
+
if len(options):
|
| 135 |
+
prompt += options_prompt
|
| 136 |
+
if 'MMBench' in dataset:
|
| 137 |
+
prompt += 'Please select the correct answer from the options above. \n'
|
| 138 |
+
else:
|
| 139 |
+
system_prompt = self.options_system_prompt + '\nPlease just indicate your choice.'
|
| 140 |
+
else:
|
| 141 |
+
system_prompt = self.wo_options_system_prompt
|
| 142 |
+
if 'MMMU' in dataset: # Corner Case
|
| 143 |
+
prompt = system_prompt + '\n' + prompt
|
| 144 |
+
system_prompt = ''
|
| 145 |
+
elif dataset is not None and listinstr(['HallusionBench'], dataset):
|
| 146 |
+
question = line['question'] + ' Yes or No?'
|
| 147 |
+
prompt = question
|
| 148 |
+
elif dataset is not None and listinstr(['MME'], dataset):
|
| 149 |
+
question = line['question'] + ' Yes or No?'
|
| 150 |
+
prompt = question
|
| 151 |
+
elif dataset is not None and listinstr(['OCRBench'], dataset):
|
| 152 |
+
system_prompt = self.vqa_prompt
|
| 153 |
+
question = line['question']
|
| 154 |
+
prompt = question
|
| 155 |
+
elif DATASET_TYPE(dataset) == 'VQA':
|
| 156 |
+
if listinstr(['LLaVABench', 'MMLongBench_DOC'], dataset):
|
| 157 |
+
system_prompt = ''
|
| 158 |
+
prompt = question
|
| 159 |
+
elif listinstr(['MMVet'], dataset):
|
| 160 |
+
system_prompt = self.detail_system_prompt
|
| 161 |
+
prompt = question
|
| 162 |
+
elif listinstr(['ChartQA'], dataset):
|
| 163 |
+
system_prompt = 'Please answer the question using a single word. '
|
| 164 |
+
prompt = question
|
| 165 |
+
else:
|
| 166 |
+
system_prompt = self.vqa_prompt
|
| 167 |
+
prompt = question
|
| 168 |
+
|
| 169 |
+
msgs = []
|
| 170 |
+
if system_prompt:
|
| 171 |
+
msgs.append(dict(type='text', value=system_prompt))
|
| 172 |
+
if isinstance(tgt_path, list):
|
| 173 |
+
msgs.extend([dict(type='image', value=p) for p in tgt_path])
|
| 174 |
+
else:
|
| 175 |
+
msgs = [dict(type='image', value=tgt_path)]
|
| 176 |
+
msgs.append(dict(type='text', value=prompt))
|
| 177 |
+
|
| 178 |
+
return msgs
|
image_mcq.py
ADDED
|
@@ -0,0 +1,1082 @@
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|
| 1 |
+
import warnings
|
| 2 |
+
import json
|
| 3 |
+
from .image_base import ImageBaseDataset
|
| 4 |
+
from .utils import build_judge, DEBUG_MESSAGE
|
| 5 |
+
from ..smp import *
|
| 6 |
+
import pandas as pd
|
| 7 |
+
|
| 8 |
+
MMMB_URLS = {
|
| 9 |
+
'MMMB_ar': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmmb/mmmb_ar.tsv',
|
| 10 |
+
'MMMB_cn': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmmb/mmmb_cn.tsv',
|
| 11 |
+
'MMMB_en': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmmb/mmmb_en.tsv',
|
| 12 |
+
'MMMB_pt': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmmb/mmmb_pt.tsv',
|
| 13 |
+
'MMMB_ru': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmmb/mmmb_ru.tsv',
|
| 14 |
+
'MMMB_tr': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmmb/mmmb_tr.tsv',
|
| 15 |
+
}
|
| 16 |
+
|
| 17 |
+
MTL_MMBench_URLS = {
|
| 18 |
+
'MMBench_dev_ar': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmbench/mmbench_dev_ar.tsv',
|
| 19 |
+
'MMBench_dev_cn': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmbench/mmbench_dev_cn.tsv',
|
| 20 |
+
'MMBench_dev_en': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmbench/mmbench_dev_en.tsv',
|
| 21 |
+
'MMBench_dev_pt': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmbench/mmbench_dev_pt.tsv',
|
| 22 |
+
'MMBench_dev_tr': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmbench/mmbench_dev_tr.tsv',
|
| 23 |
+
'MMBench_dev_ru': 'https://huggingface.co/datasets/AIDC-AI/Parrot-dataset/resolve/main/mmbench/mmbench_dev_ru.tsv',
|
| 24 |
+
}
|
| 25 |
+
|
| 26 |
+
MMMB_MD5 = {
|
| 27 |
+
'MMMB_ar': 'f3a18b6385f1d9701840aa42de27aead', 'MMMB_cn': '13ed82fa89730037292fcaa27f08f430',
|
| 28 |
+
'MMMB_en': '1cd781a71ec5a2983c090b84105d6a01', 'MMMB_pt': '548ea2b3bb2da991790386f0015d30d1',
|
| 29 |
+
'MMMB_ru': 'ce1cc8a0533425ab0d86b326ebfc2984', 'MMMB_tr': '0733739d43090327975294292bc5cd67'
|
| 30 |
+
}
|
| 31 |
+
|
| 32 |
+
MTL_MMBench_MD5 = {
|
| 33 |
+
'MMBench_dev_ar': '4271b4a0d0200e1a86380a878e0d64a4', 'MMBench_dev_cn': '2ed5135326fed02c8e51ea50dda8222f',
|
| 34 |
+
'MMBench_dev_en': 'd9ab776fc018b3d45785e9a5c23431c2', 'MMBench_dev_pt': '4ddfbcd27ef12444b908c03831cd0295',
|
| 35 |
+
'MMBench_dev_tr': '4fab39d501389d3d6cc90264bb708f11', 'MMBench_dev_ru': '5ba1171ff2e68f80637bf78349e402a5'
|
| 36 |
+
}
|
| 37 |
+
|
| 38 |
+
|
| 39 |
+
class ImageMCQDataset(ImageBaseDataset):
|
| 40 |
+
|
| 41 |
+
TYPE = 'MCQ'
|
| 42 |
+
|
| 43 |
+
DATASET_URL = {
|
| 44 |
+
# MMBench v1.0
|
| 45 |
+
'MMBench_DEV_EN': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_DEV_EN.tsv',
|
| 46 |
+
'MMBench_TEST_EN': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_TEST_EN.tsv',
|
| 47 |
+
'MMBench_DEV_CN': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_DEV_CN.tsv',
|
| 48 |
+
'MMBench_TEST_CN': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_TEST_CN.tsv',
|
| 49 |
+
'MMBench': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench.tsv', # Internal
|
| 50 |
+
'MMBench_CN': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_CN.tsv', # Internal
|
| 51 |
+
# MMBench v1.1
|
| 52 |
+
'MMBench_DEV_EN_V11': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_DEV_EN_V11.tsv',
|
| 53 |
+
'MMBench_TEST_EN_V11': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_TEST_EN_V11.tsv',
|
| 54 |
+
'MMBench_DEV_CN_V11': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_DEV_CN_V11.tsv',
|
| 55 |
+
'MMBench_TEST_CN_V11': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_TEST_CN_V11.tsv',
|
| 56 |
+
'MMBench_V11': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_V11.tsv', # Internal
|
| 57 |
+
'MMBench_CN_V11': 'https://opencompass.openxlab.space/utils/benchmarks/MMBench/MMBench_CN_V11.tsv', # Internal
|
| 58 |
+
# SEEDBench Series
|
| 59 |
+
'SEEDBench_IMG': 'https://opencompass.openxlab.space/utils/benchmarks/SEEDBench/SEEDBench_IMG.tsv',
|
| 60 |
+
'SEEDBench2': 'https://huggingface.co/datasets/VLMEval/SEEDBench2/resolve/main/SEEDBench2.tsv',
|
| 61 |
+
'SEEDBench2_Plus': 'https://opencompass.openxlab.space/utils/benchmarks/SEEDBench/SEEDBench2_Plus.tsv',
|
| 62 |
+
# ScienceQA Series
|
| 63 |
+
'ScienceQA_VAL': 'https://opencompass.openxlab.space/utils/benchmarks/ScienceQA/ScienceQA_VAL.tsv',
|
| 64 |
+
'ScienceQA_TEST': 'https://opencompass.openxlab.space/utils/benchmarks/ScienceQA/ScienceQA_TEST.tsv',
|
| 65 |
+
# MMT-Bench
|
| 66 |
+
'MMT-Bench_ALL_MI': 'https://opencompass.openxlab.space/utils/benchmarks/MMT-Bench/MMT-Bench_ALL_MI.tsv',
|
| 67 |
+
'MMT-Bench_ALL': 'https://opencompass.openxlab.space/utils/benchmarks/MMT-Bench/MMT-Bench_ALL.tsv',
|
| 68 |
+
'MMT-Bench_VAL_MI': 'https://opencompass.openxlab.space/utils/benchmarks/MMT-Bench/MMT-Bench_VAL_MI.tsv',
|
| 69 |
+
'MMT-Bench_VAL': 'https://opencompass.openxlab.space/utils/benchmarks/MMT-Bench/MMT-Bench_VAL.tsv',
|
| 70 |
+
# AesBench
|
| 71 |
+
'AesBench_VAL': 'https://huggingface.co/datasets/VLMEval/AesBench/resolve/main/AesBench_VAL.tsv',
|
| 72 |
+
'AesBench_TEST': 'https://huggingface.co/datasets/VLMEval/AesBench/resolve/main/AesBench_TEST.tsv',
|
| 73 |
+
# Q-Bench1
|
| 74 |
+
'Q-Bench1_VAL': 'https://huggingface.co/datasets/zhangzicheng/qbench_tsv/resolve/main/Q-Bench1_VAL.tsv',
|
| 75 |
+
'Q-Bench1_TEST': 'https://huggingface.co/datasets/zhangzicheng/qbench_tsv/resolve/main/Q-Bench1_TEST.tsv',
|
| 76 |
+
# A-Bench
|
| 77 |
+
'A-Bench_VAL': 'https://huggingface.co/datasets/zhangzicheng/abench_tsv/resolve/main/A-bench_VAL.tsv',
|
| 78 |
+
'A-Bench_TEST': 'https://huggingface.co/datasets/zhangzicheng/abench_tsv/resolve/main/A-bench_TEST.tsv',
|
| 79 |
+
# R-Bench
|
| 80 |
+
'R-Bench-Dis': 'https://huggingface.co/datasets/lcysyzxdxc/R-Bench/blob/main/R-bench-dis.tsv',
|
| 81 |
+
'R-Bench-Ref': 'https://huggingface.co/datasets/lcysyzxdxc/R-Bench/blob/main/R-bench-ref.tsv',
|
| 82 |
+
# Other Benchmarks
|
| 83 |
+
'CCBench': 'https://opencompass.openxlab.space/utils/VLMEval/CCBench.tsv',
|
| 84 |
+
'AI2D_TEST': 'https://opencompass.openxlab.space/utils/VLMEval/AI2D_TEST.tsv',
|
| 85 |
+
'AI2D_TEST_NO_MASK': 'https://opencompass.openxlab.space/utils/VLMEval/AI2D_TEST_NO_MASK.tsv',
|
| 86 |
+
'MMStar': 'https://opencompass.openxlab.space/utils/VLMEval/MMStar.tsv',
|
| 87 |
+
'RealWorldQA': 'https://opencompass.openxlab.space/utils/VLMEval/RealWorldQA.tsv',
|
| 88 |
+
'MLLMGuard_DS': 'https://opencompass.openxlab.space/utils/VLMEval/MLLMGuard_DS.tsv',
|
| 89 |
+
'BLINK': 'https://opencompass.openxlab.space/utils/VLMEval/BLINK.tsv',
|
| 90 |
+
'TaskMeAnything_v1_imageqa_random': (
|
| 91 |
+
'https://huggingface.co/datasets/weikaih/TaskMeAnything-v1-imageqa-random/'
|
| 92 |
+
'resolve/main/TaskMeAnything-v1-imageqa-random.tsv'
|
| 93 |
+
),
|
| 94 |
+
'A-OKVQA': 'https://huggingface.co/datasets/Allen8/A-OKVQA/resolve/main/a-okvqa.tsv',
|
| 95 |
+
'WorldMedQA-V': 'https://opencompass.openxlab.space/utils/VLMEval/WorldMedQA-V.tsv',
|
| 96 |
+
'VisOnlyQA-VLMEvalKit': (
|
| 97 |
+
'https://huggingface.co/datasets/ryokamoi/VisOnlyQA_Eval_Real/'
|
| 98 |
+
'resolve/main/visonlyqa_vlmevalkit.tsv'
|
| 99 |
+
),
|
| 100 |
+
'3DSRBench': (
|
| 101 |
+
'https://huggingface.co/datasets/ccvl/3DSRBench/'
|
| 102 |
+
'resolve/main/3dsrbench_v1_vlmevalkit_circular.tsv'
|
| 103 |
+
),
|
| 104 |
+
}
|
| 105 |
+
|
| 106 |
+
DATASET_MD5 = {
|
| 107 |
+
# MMBench v1.0
|
| 108 |
+
'MMBench_DEV_EN': 'b6caf1133a01c6bb705cf753bb527ed8',
|
| 109 |
+
'MMBench_TEST_EN': '6939fadb0ce626fefc0bdc9c64efc528',
|
| 110 |
+
'MMBench_DEV_CN': '08b8fc3324a5ed74155350f57be69fbd',
|
| 111 |
+
'MMBench_TEST_CN': '7e1239baf0ee4c8b513e19705a0f317e',
|
| 112 |
+
'MMBench': '4115aea3383f3dd0083be6a633e0f820', # Internal Only
|
| 113 |
+
'MMBench_CN': '2e053ffc90ea598b1feae13c36dc13ee', # Internal Only
|
| 114 |
+
# MMBench v1.1
|
| 115 |
+
'MMBench_DEV_EN_V11': '30c05be8f2f347a50be25aa067248184',
|
| 116 |
+
'MMBench_TEST_EN_V11': '26f0f15381a21720255091d3e0316ce6',
|
| 117 |
+
'MMBench_DEV_CN_V11': '593f9b5f6bea453d870a798b34ae4f37',
|
| 118 |
+
'MMBench_TEST_CN_V11': '74bbe4556dac745613c7cbe5ad787050',
|
| 119 |
+
'MMBench_V11': 'b9276414f57af1308dcc4d0cd9b42e7c', # Internal Only
|
| 120 |
+
'MMBench_CN_V11': '95f6980dd1b4de38e3cbffe0305a3f25', # Internal Only
|
| 121 |
+
# SEEDBench
|
| 122 |
+
'SEEDBench_IMG': '68017231464752261a2526d6ca3a10c0',
|
| 123 |
+
'SEEDBench2': '4ec15cf864c4f16274112284f531813e',
|
| 124 |
+
'SEEDBench2_Plus': 'e32d3216dc4f452b0fe497a52015d1fd',
|
| 125 |
+
# ScienceQA
|
| 126 |
+
'ScienceQA_VAL': '96320d05e142e585e7204e72affd29f3',
|
| 127 |
+
'ScienceQA_TEST': 'e42e9e00f9c59a80d8a5db35bc32b71f',
|
| 128 |
+
# MMT-Bench
|
| 129 |
+
'MMT-Bench_ALL_MI': '5272157097e19cdd7cb41e412ab3b7c7',
|
| 130 |
+
'MMT-Bench_ALL': 'b273a2f4c596fe4f2605de0494cd632f',
|
| 131 |
+
'MMT-Bench_VAL_MI': 'c7d7b998eb5cd9aa36c7d4f721472462',
|
| 132 |
+
'MMT-Bench_VAL': '8dd4b730f53dbf9c3aed90ca31c928e0',
|
| 133 |
+
# AesBench
|
| 134 |
+
'AesBench_VAL': '3edb0c319e9187aa0b97fe7a11700a8c',
|
| 135 |
+
'AesBench_TEST': '58b1f7ba2cc32e1d68896d6ee716bbf8',
|
| 136 |
+
# Q-Bench1
|
| 137 |
+
'Q-Bench1_VAL': '837bdb6cd2da571713543462815187b7',
|
| 138 |
+
'Q-Bench1_TEST': '15e759bfd58c9d5f30b23a317d347153',
|
| 139 |
+
# A-Bench
|
| 140 |
+
'A-Bench_VAL': '218563ec50d34bb336c814143a5bb9c1',
|
| 141 |
+
'A-Bench_TEST': '567013fb033a20cf23f51d8e865bd16c',
|
| 142 |
+
# R-Bench
|
| 143 |
+
'R-Bench-Dis': 'd6e961dbfc43350688af2560226830b4',
|
| 144 |
+
'R-Bench-Ref': '270c1cb555acb523f3fdb178ed57021d',
|
| 145 |
+
# Other Benchmarks
|
| 146 |
+
'CCBench': 'f5dde47f24dc5a6fb6e595b409b466ac',
|
| 147 |
+
'AI2D_TEST': '0f593e0d1c7df9a3d69bf1f947e71975',
|
| 148 |
+
'AI2D_TEST_NO_MASK': 'fd8f463634d4fe9fbd23b876e8eea5be',
|
| 149 |
+
'MMStar': 'e1ecd2140806c1b1bbf54b43372efb9e',
|
| 150 |
+
'RealWorldQA': '4de008f55dc4fd008ca9e15321dc44b7',
|
| 151 |
+
'MLLMGuard_DS': '975fc0dd7119386e198c37d71e274b3f',
|
| 152 |
+
'BLINK': '3b6649b6a662184ea046908e5506260e',
|
| 153 |
+
'TaskMeAnything_v1_imageqa_random': '023fef69e2ca21827afb77c5ec3bc889',
|
| 154 |
+
'WorldMedQA-V': '441e63875e30c87f5750528b57b41285',
|
| 155 |
+
"VisOnlyQA-VLMEvalKit": 'cf460a31d2acb8d3a7cecd0e69298bfa',
|
| 156 |
+
'3DSRBench': '13a99f33164dc1b9faf0e8b8b01fd6f2',
|
| 157 |
+
}
|
| 158 |
+
|
| 159 |
+
DATASET_URL.update(MMMB_URLS)
|
| 160 |
+
DATASET_URL.update(MTL_MMBench_URLS)
|
| 161 |
+
DATASET_MD5.update(MMMB_MD5)
|
| 162 |
+
DATASET_MD5.update(MTL_MMBench_MD5)
|
| 163 |
+
|
| 164 |
+
def build_prompt(self, line):
|
| 165 |
+
|
| 166 |
+
if isinstance(line, int):
|
| 167 |
+
line = self.data.iloc[line]
|
| 168 |
+
|
| 169 |
+
if self.meta_only:
|
| 170 |
+
tgt_path = toliststr(line['image_path'])
|
| 171 |
+
else:
|
| 172 |
+
tgt_path = self.dump_image(line)
|
| 173 |
+
|
| 174 |
+
question = line['question']
|
| 175 |
+
options = {
|
| 176 |
+
cand: line[cand]
|
| 177 |
+
for cand in string.ascii_uppercase
|
| 178 |
+
if cand in line and not pd.isna(line[cand])
|
| 179 |
+
}
|
| 180 |
+
options_prompt = 'Options:\n'
|
| 181 |
+
for key, item in options.items():
|
| 182 |
+
options_prompt += f'{key}. {item}\n'
|
| 183 |
+
hint = line['hint'] if ('hint' in line and not pd.isna(line['hint'])) else None
|
| 184 |
+
prompt = ''
|
| 185 |
+
if hint is not None:
|
| 186 |
+
prompt += f'Hint: {hint}\n'
|
| 187 |
+
prompt += f'Question: {question}\n'
|
| 188 |
+
if len(options):
|
| 189 |
+
prompt += options_prompt
|
| 190 |
+
prompt += 'Please select the correct answer from the options above. \n'
|
| 191 |
+
|
| 192 |
+
msgs = []
|
| 193 |
+
if isinstance(tgt_path, list):
|
| 194 |
+
msgs.extend([dict(type='image', value=p) for p in tgt_path])
|
| 195 |
+
else:
|
| 196 |
+
msgs = [dict(type='image', value=tgt_path)]
|
| 197 |
+
msgs.append(dict(type='text', value=prompt))
|
| 198 |
+
|
| 199 |
+
return msgs
|
| 200 |
+
|
| 201 |
+
def evaluate(self, eval_file, **judge_kwargs):
|
| 202 |
+
from .utils.multiple_choice import report_acc, report_acc_MMT, mcq_circular_eval, mcq_vanilla_eval
|
| 203 |
+
# assert dataset is not None
|
| 204 |
+
dataset_map = {
|
| 205 |
+
'MMBench_TEST_EN': 'MMBench', 'MMBench_TEST_EN_V11': 'MMBench_V11',
|
| 206 |
+
'MMBench_TEST_CN': 'MMBench_CN', 'MMBench_TEST_CN_V11': 'MMBench_CN_V11'
|
| 207 |
+
}
|
| 208 |
+
dataset = self.dataset_name
|
| 209 |
+
if dataset in dataset_map:
|
| 210 |
+
dataset = dataset_map[dataset]
|
| 211 |
+
nproc = judge_kwargs.pop('nproc', 4)
|
| 212 |
+
|
| 213 |
+
circular = False
|
| 214 |
+
if listinstr(['mmbench', 'ccbench'], dataset.lower()):
|
| 215 |
+
data = load(eval_file)
|
| 216 |
+
data['index'] = [int(x) for x in data['index']]
|
| 217 |
+
dump(data, eval_file)
|
| 218 |
+
circular = True
|
| 219 |
+
|
| 220 |
+
suffix = eval_file.split('.')[-1]
|
| 221 |
+
model = judge_kwargs.get('model', 'exact_matching')
|
| 222 |
+
assert model in ['chatgpt-0125', 'exact_matching', 'gpt-4-0125']
|
| 223 |
+
name_str_map = {'chatgpt-0125': 'openai', 'gpt-4-0125': 'gpt4'}
|
| 224 |
+
name_str = name_str_map[model] if model in name_str_map else model
|
| 225 |
+
|
| 226 |
+
if model == 'exact_matching':
|
| 227 |
+
model = None
|
| 228 |
+
elif gpt_key_set():
|
| 229 |
+
model = build_judge(**judge_kwargs)
|
| 230 |
+
if not model.working():
|
| 231 |
+
warnings.warn('OPENAI API is not working properly, will use exact matching for evaluation')
|
| 232 |
+
warnings.warn(DEBUG_MESSAGE)
|
| 233 |
+
model = None
|
| 234 |
+
else:
|
| 235 |
+
warnings.warn('OPENAI_API_KEY is not set properly, will use exact matching for evaluation')
|
| 236 |
+
model = None
|
| 237 |
+
|
| 238 |
+
result_file = eval_file.replace(f'.{suffix}', f'_{name_str}_result.pkl')
|
| 239 |
+
|
| 240 |
+
data = load(eval_file)
|
| 241 |
+
data = data.sort_values(by='index')
|
| 242 |
+
data['prediction'] = [str(x) for x in data['prediction']]
|
| 243 |
+
# If not choice label, then use lower case
|
| 244 |
+
for k in data.keys():
|
| 245 |
+
data[k.lower() if k not in list(string.ascii_uppercase) else k] = data.pop(k)
|
| 246 |
+
|
| 247 |
+
meta = self.data
|
| 248 |
+
meta_q_map = {x: y for x, y in zip(meta['index'], meta['question'])}
|
| 249 |
+
data_map = {x: y for x, y in zip(data['index'], data['question'])}
|
| 250 |
+
for k in data_map:
|
| 251 |
+
assert k in meta_q_map, (
|
| 252 |
+
f'eval_file should be the same as or a subset of dataset {self.dataset_name}'
|
| 253 |
+
)
|
| 254 |
+
|
| 255 |
+
if circular:
|
| 256 |
+
data = mcq_circular_eval(model, data, meta, nproc, result_file, self.dataset_name)
|
| 257 |
+
else:
|
| 258 |
+
data = mcq_vanilla_eval(model, data, meta, nproc, result_file, self.dataset_name)
|
| 259 |
+
|
| 260 |
+
# load split
|
| 261 |
+
dump(data, eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 262 |
+
data = load(eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 263 |
+
|
| 264 |
+
# May have different report acc functions for different datasets
|
| 265 |
+
if 'MMT' in dataset:
|
| 266 |
+
acc = report_acc_MMT(data)
|
| 267 |
+
else:
|
| 268 |
+
acc = report_acc(data)
|
| 269 |
+
|
| 270 |
+
score_file = eval_file.replace(f'.{suffix}', '_acc.csv')
|
| 271 |
+
dump(acc, score_file)
|
| 272 |
+
|
| 273 |
+
if dataset == 'AesBench_VAL':
|
| 274 |
+
warnings.warn('Note that AesBench VAL is just a toy version of AesBench TEST. For full results, \
|
| 275 |
+
please evaluate on AesBench TEST. The AesBench TEST dataset is more than 20 times \
|
| 276 |
+
larger than the VAL dataset and the leaderboard results are based on AesBench TEST.')
|
| 277 |
+
if dataset == 'VisOnlyQA-VLMEvalKit':
|
| 278 |
+
warnings.warn('Note that the results on VisOnlyQA-VLMEvalKit are different from the results on \
|
| 279 |
+
the original VisOnlyQA. VisOnlyQA-VLMEvalKit does not include the \
|
| 280 |
+
chemistry__shape_multi split and uses a different evaluation prompt. Please \
|
| 281 |
+
explicitly specify the version of the dataset when you report results.')
|
| 282 |
+
|
| 283 |
+
return acc
|
| 284 |
+
|
| 285 |
+
|
| 286 |
+
class OpenMMMedical(ImageMCQDataset):
|
| 287 |
+
@classmethod
|
| 288 |
+
def supported_datasets(cls):
|
| 289 |
+
return ['OpenMMMedical']
|
| 290 |
+
|
| 291 |
+
def load_data(self, dataset='OpenMMMedical'):
|
| 292 |
+
image_folder = "/your/path/to/OpenMM_Medical"
|
| 293 |
+
def generate_tsv(pth):
|
| 294 |
+
import csv
|
| 295 |
+
from pathlib import Path
|
| 296 |
+
tsv_file_path = os.path.join(LMUDataRoot(), f'{dataset}.tsv')
|
| 297 |
+
|
| 298 |
+
if os.path.exists(tsv_file_path):
|
| 299 |
+
print(f'{tsv_file_path} already exists.')
|
| 300 |
+
return
|
| 301 |
+
|
| 302 |
+
path = Path(pth)
|
| 303 |
+
json_files = [str(f) for f in path.rglob('*.json')]
|
| 304 |
+
fieldnames = ["index", "dataset", "question_id", "question_type", "question", "A", "B", "C", "D", "E", "answer", "image_path"]
|
| 305 |
+
index = 0
|
| 306 |
+
with open(tsv_file_path, 'w', encoding='utf-8', newline='') as tsv_file:
|
| 307 |
+
writer = csv.DictWriter(tsv_file, fieldnames=fieldnames, delimiter='\t')
|
| 308 |
+
writer.writeheader()
|
| 309 |
+
for json_file in json_files:
|
| 310 |
+
data_name = json_file.split('/')[-1].split('.')[0]
|
| 311 |
+
with open(json_file, 'r', encoding='utf-8') as f:
|
| 312 |
+
data = json.load(f)
|
| 313 |
+
for row in data:
|
| 314 |
+
line = {}
|
| 315 |
+
line['index'] = index
|
| 316 |
+
line['dataset'] = row['dataset']
|
| 317 |
+
line['question_id'] = row['question_id']
|
| 318 |
+
line['question_type'] = row['question_type']
|
| 319 |
+
line['question'] = row['question']
|
| 320 |
+
choices_letter = ["A", "B", "C", "D", "E"]
|
| 321 |
+
for i in range(len(choices_letter)):
|
| 322 |
+
if f"option_{choices_letter[i]}" in row:
|
| 323 |
+
line[choices_letter[i]] = row[f"option_{choices_letter[i]}"]
|
| 324 |
+
if row[f"option_{choices_letter[i]}"] == row['gt_answer']:
|
| 325 |
+
line['answer'] = choices_letter[i]
|
| 326 |
+
else:
|
| 327 |
+
break
|
| 328 |
+
line['image_path'] = os.path.join(image_folder, row['image_path'])
|
| 329 |
+
index += 1
|
| 330 |
+
writer.writerow(line)
|
| 331 |
+
print(f'TSV file saved to {tsv_file_path}')
|
| 332 |
+
|
| 333 |
+
generate_tsv(image_folder)
|
| 334 |
+
update_flag = True
|
| 335 |
+
|
| 336 |
+
data_path = os.path.join(LMUDataRoot(), f'{dataset}.tsv')
|
| 337 |
+
if file_size(data_path, 'GB') > 1:
|
| 338 |
+
local_path = data_path.replace('.tsv', '_local.tsv')
|
| 339 |
+
if not osp.exists(local_path) or os.environ.get('FORCE_LOCAL', None) or update_flag:
|
| 340 |
+
from vlmeval.tools import LOCALIZE
|
| 341 |
+
LOCALIZE(data_path, local_path)
|
| 342 |
+
data_path = local_path
|
| 343 |
+
return load(data_path)
|
| 344 |
+
|
| 345 |
+
# Given one data record, return the built prompt (a multi-modal message), can override
|
| 346 |
+
def build_prompt(self, line):
|
| 347 |
+
if isinstance(line, int):
|
| 348 |
+
line = self.data.iloc[line]
|
| 349 |
+
|
| 350 |
+
if self.meta_only:
|
| 351 |
+
tgt_path = toliststr(line['image_path'])
|
| 352 |
+
else:
|
| 353 |
+
tgt_path = self.dump_image(line)
|
| 354 |
+
|
| 355 |
+
question = line['question']
|
| 356 |
+
options = {
|
| 357 |
+
cand: line[cand]
|
| 358 |
+
for cand in string.ascii_uppercase
|
| 359 |
+
if cand in line and not pd.isna(line[cand])
|
| 360 |
+
}
|
| 361 |
+
options_prompt = 'Options:\n'
|
| 362 |
+
for key, item in options.items():
|
| 363 |
+
options_prompt += f'{key}. {item}\n'
|
| 364 |
+
hint = line['hint'] if ('hint' in line and not pd.isna(line['hint'])) else None
|
| 365 |
+
prompt = ''
|
| 366 |
+
if hint is not None:
|
| 367 |
+
prompt += f'Hint: {hint}\n'
|
| 368 |
+
prompt += f'Question: {question}\n'
|
| 369 |
+
prompt += options_prompt
|
| 370 |
+
prompt += "Answer with the option's letter from the given choices directly.\n"
|
| 371 |
+
# prompt += "Please select the correct answer from the options above. \n"
|
| 372 |
+
|
| 373 |
+
msgs = []
|
| 374 |
+
if tgt_path:
|
| 375 |
+
if isinstance(tgt_path, list):
|
| 376 |
+
msgs.extend([dict(type='image', value=p) for p in tgt_path])
|
| 377 |
+
else:
|
| 378 |
+
msgs = [dict(type='image', value=tgt_path)]
|
| 379 |
+
msgs.append(dict(type='text', value=prompt))
|
| 380 |
+
return msgs
|
| 381 |
+
|
| 382 |
+
def report_acc_by_groups(self, df, group_column):
|
| 383 |
+
res = defaultdict(list)
|
| 384 |
+
|
| 385 |
+
# Check for the 'split' column
|
| 386 |
+
if 'split' in df:
|
| 387 |
+
splits = list(set(df['split']))
|
| 388 |
+
res['split'] = splits
|
| 389 |
+
else:
|
| 390 |
+
df['split'] = ['none'] * len(df)
|
| 391 |
+
res['split'] = ['none']
|
| 392 |
+
|
| 393 |
+
res['Overall'] = [np.mean(df[df['split'] == sp]['hit']) for sp in res['split']]
|
| 394 |
+
|
| 395 |
+
if group_column not in df:
|
| 396 |
+
raise ValueError(f"Column '{group_column}' not found in dataframe.") # noqa: E713
|
| 397 |
+
|
| 398 |
+
abilities = list(set(df[group_column]))
|
| 399 |
+
abilities = ['None' if isinstance(ab, float) and pd.isna(ab) else ab for ab in abilities]
|
| 400 |
+
abilities.sort()
|
| 401 |
+
|
| 402 |
+
for ab in abilities:
|
| 403 |
+
ab_name = ab
|
| 404 |
+
sub_df = df[df[group_column] == ab]
|
| 405 |
+
res[ab_name] = [np.mean(sub_df[sub_df['split'] == sp]['hit']) for sp in res['split']]
|
| 406 |
+
|
| 407 |
+
return pd.DataFrame(res)
|
| 408 |
+
|
| 409 |
+
def evaluate(self, eval_file, **judge_kwargs):
|
| 410 |
+
from .utils.multiple_choice import report_acc, mcq_vanilla_eval
|
| 411 |
+
nproc = judge_kwargs.pop('nproc', 4)
|
| 412 |
+
|
| 413 |
+
suffix = eval_file.split('.')[-1]
|
| 414 |
+
model = judge_kwargs.get('model', 'exact_matching')
|
| 415 |
+
assert model in ['chatgpt-0125', 'exact_matching', 'gpt-4-0125', 'gpt-4o']
|
| 416 |
+
name_str_map = {'chatgpt-0125': 'openai', 'gpt-4-0125': 'gpt4', 'gpt-4o': 'gpt4o'}
|
| 417 |
+
name_str = name_str_map[model] if model in name_str_map else model
|
| 418 |
+
|
| 419 |
+
if model == 'exact_matching':
|
| 420 |
+
model = None
|
| 421 |
+
elif gpt_key_set():
|
| 422 |
+
model = build_judge(**judge_kwargs)
|
| 423 |
+
if not model.working():
|
| 424 |
+
warnings.warn('OPENAI API is not working properly, will use exact matching for evaluation')
|
| 425 |
+
warnings.warn(DEBUG_MESSAGE)
|
| 426 |
+
model = None
|
| 427 |
+
else:
|
| 428 |
+
warnings.warn('OPENAI_API_KEY is not set properly, will use exact matching for evaluation')
|
| 429 |
+
model = None
|
| 430 |
+
|
| 431 |
+
result_file = eval_file.replace(f'.{suffix}', f'_{name_str}_result.pkl')
|
| 432 |
+
|
| 433 |
+
data = load(eval_file)
|
| 434 |
+
data = data.sort_values(by='index')
|
| 435 |
+
data['prediction'] = [str(x) for x in data['prediction']]
|
| 436 |
+
# If not choice label, then use lower case
|
| 437 |
+
for k in data.keys():
|
| 438 |
+
data[k.lower() if k not in list(string.ascii_uppercase) else k] = data.pop(k)
|
| 439 |
+
|
| 440 |
+
meta = self.data
|
| 441 |
+
meta_q_map = {x: y for x, y in zip(meta['index'], meta['question'])}
|
| 442 |
+
data_map = {x: y for x, y in zip(data['index'], data['question'])}
|
| 443 |
+
for k in data_map:
|
| 444 |
+
assert k in meta_q_map, (
|
| 445 |
+
f'eval_file should be the same as or a subset of dataset {self.dataset_name}'
|
| 446 |
+
)
|
| 447 |
+
|
| 448 |
+
data = mcq_vanilla_eval(model, data, meta, nproc, result_file, self.dataset_name)
|
| 449 |
+
|
| 450 |
+
# load split
|
| 451 |
+
dump(data, eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 452 |
+
data = load(eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 453 |
+
|
| 454 |
+
acc = report_acc(data)
|
| 455 |
+
|
| 456 |
+
for group_col in ['dataset']:
|
| 457 |
+
acc_grouped = self.report_acc_by_groups(data, group_col)
|
| 458 |
+
score_file_grouped = eval_file.replace(f'.{suffix}', f'_{group_col}_acc.csv')
|
| 459 |
+
dump(acc_grouped, score_file_grouped)
|
| 460 |
+
|
| 461 |
+
return acc
|
| 462 |
+
|
| 463 |
+
|
| 464 |
+
class MMMUDataset(ImageMCQDataset):
|
| 465 |
+
|
| 466 |
+
DATASET_URL = {
|
| 467 |
+
'MMMU_DEV_VAL': 'https://opencompass.openxlab.space/utils/VLMEval/MMMU_DEV_VAL.tsv',
|
| 468 |
+
'MMMU_TEST': 'https://opencompass.openxlab.space/utils/VLMEval/MMMU_TEST.tsv',
|
| 469 |
+
}
|
| 470 |
+
|
| 471 |
+
DATASET_MD5 = {
|
| 472 |
+
'MMMU_DEV_VAL': '585e8ad75e73f75dcad265dfd0417d64',
|
| 473 |
+
'MMMU_TEST': 'c19875d11a2d348d07e5eb4bdf33166d',
|
| 474 |
+
}
|
| 475 |
+
|
| 476 |
+
@staticmethod
|
| 477 |
+
def split_MMMU(msgs):
|
| 478 |
+
text, images = None, []
|
| 479 |
+
for s in msgs:
|
| 480 |
+
if s['type'] == 'image':
|
| 481 |
+
images.append(s['value'])
|
| 482 |
+
elif s['type'] == 'text':
|
| 483 |
+
assert text is None
|
| 484 |
+
text = s['value']
|
| 485 |
+
text_segs = text.split('<image ')
|
| 486 |
+
if len(text_segs) == 1:
|
| 487 |
+
return msgs
|
| 488 |
+
|
| 489 |
+
segs = [dict(type='text', value=text_segs[0])]
|
| 490 |
+
for i, seg in enumerate(text_segs):
|
| 491 |
+
if i == 0:
|
| 492 |
+
continue
|
| 493 |
+
assert istype(seg[0], int) and seg[1] == '>'
|
| 494 |
+
image_idx = int(seg[0]) - 1
|
| 495 |
+
segs.append(dict(type='image', value=images[image_idx]))
|
| 496 |
+
segs.append(dict(type='text', value=seg[2:]))
|
| 497 |
+
return segs
|
| 498 |
+
|
| 499 |
+
def build_prompt(self, line):
|
| 500 |
+
msgs = super().build_prompt(line)
|
| 501 |
+
msgs = self.split_MMMU(msgs)
|
| 502 |
+
return msgs
|
| 503 |
+
|
| 504 |
+
|
| 505 |
+
class MUIRDataset(ImageMCQDataset):
|
| 506 |
+
|
| 507 |
+
DATASET_URL = {
|
| 508 |
+
'MUIRBench': 'http://opencompass.openxxlab.com/utils/VLMEval/MUIRBench.tsv'
|
| 509 |
+
}
|
| 510 |
+
|
| 511 |
+
DATASET_MD5 = {
|
| 512 |
+
'MUIRBench': '2e5e6fd7699761b08a7cb3ab8c0c2ec8'
|
| 513 |
+
}
|
| 514 |
+
|
| 515 |
+
@staticmethod
|
| 516 |
+
def split_MUIR(msgs):
|
| 517 |
+
text, images = None, []
|
| 518 |
+
|
| 519 |
+
# Separate images and text from msgs
|
| 520 |
+
for s in msgs:
|
| 521 |
+
if s['type'] == 'image':
|
| 522 |
+
images.append(s['value'])
|
| 523 |
+
elif s['type'] == 'text':
|
| 524 |
+
assert text is None # Ensure only one text entry is expected
|
| 525 |
+
text = s['value']
|
| 526 |
+
|
| 527 |
+
# Split text by <image> tags
|
| 528 |
+
text_segs = text.split('<image>')
|
| 529 |
+
|
| 530 |
+
# Initialize the segments list
|
| 531 |
+
segs = []
|
| 532 |
+
|
| 533 |
+
# Iterate through the text segments and images
|
| 534 |
+
for i, seg in enumerate(text_segs):
|
| 535 |
+
# Append the image if this is not the first segment and there are still images left
|
| 536 |
+
if i > 0 and i - 1 < len(images):
|
| 537 |
+
segs.append(dict(type='image', value=images[i - 1]))
|
| 538 |
+
# Append the text segment (if it's non-empty)
|
| 539 |
+
if len(seg) > 0:
|
| 540 |
+
segs.append(dict(type='text', value=seg))
|
| 541 |
+
|
| 542 |
+
return segs
|
| 543 |
+
|
| 544 |
+
def build_prompt(self, line):
|
| 545 |
+
|
| 546 |
+
if isinstance(line, int):
|
| 547 |
+
line = self.data.iloc[line]
|
| 548 |
+
|
| 549 |
+
if self.meta_only:
|
| 550 |
+
tgt_path = toliststr(line['image_path'])
|
| 551 |
+
else:
|
| 552 |
+
tgt_path = self.dump_image(line)
|
| 553 |
+
|
| 554 |
+
question = line['question']
|
| 555 |
+
options = {
|
| 556 |
+
cand: line[cand]
|
| 557 |
+
for cand in string.ascii_uppercase
|
| 558 |
+
if cand in line and not pd.isna(line[cand])
|
| 559 |
+
}
|
| 560 |
+
# options_prompt = ''
|
| 561 |
+
options_prompt = '\n'.join([f'{key}. {item}' for key, item in options.items()])
|
| 562 |
+
# for key, item in options.items():
|
| 563 |
+
# options_prompt += f'{key}. {item}\n'
|
| 564 |
+
|
| 565 |
+
prompt = ''
|
| 566 |
+
|
| 567 |
+
prompt += f'{question}\n'
|
| 568 |
+
if len(options):
|
| 569 |
+
prompt += options_prompt
|
| 570 |
+
prompt += "\nAnswer with the option's letter from the given choices directly."
|
| 571 |
+
|
| 572 |
+
msgs = []
|
| 573 |
+
if isinstance(tgt_path, list):
|
| 574 |
+
msgs.extend([dict(type='image', value=p) for p in tgt_path])
|
| 575 |
+
else:
|
| 576 |
+
msgs = [dict(type='image', value=tgt_path)]
|
| 577 |
+
msgs.append(dict(type='text', value=prompt))
|
| 578 |
+
|
| 579 |
+
msgs = self.split_MUIR(msgs)
|
| 580 |
+
return msgs
|
| 581 |
+
|
| 582 |
+
|
| 583 |
+
class GMAIMMBenchDataset(ImageMCQDataset):
|
| 584 |
+
|
| 585 |
+
DATASET_URL = {
|
| 586 |
+
'GMAI-MMBench_VAL': 'https://huggingface.co/datasets/VLMEval/GMAI-MMBench/resolve/main/GMAI-MMBench_VAL.tsv',
|
| 587 |
+
'GMAI_mm_bench_TEST_part_1': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_1.tsv', # noqa: E501
|
| 588 |
+
'GMAI_mm_bench_TEST_part_2': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_2.tsv', # noqa: E501
|
| 589 |
+
'GMAI_mm_bench_TEST_part_3': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_3.tsv', # noqa: E501
|
| 590 |
+
'GMAI_mm_bench_TEST_part_4': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_4.tsv', # noqa: E501
|
| 591 |
+
'GMAI_mm_bench_TEST_part_5': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_5.tsv', # noqa: E501
|
| 592 |
+
'GMAI_mm_bench_TEST_part_6': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_6.tsv', # noqa: E501
|
| 593 |
+
'GMAI_mm_bench_TEST_part_7': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_7.tsv', # noqa: E501
|
| 594 |
+
'GMAI_mm_bench_TEST_part_8': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_8.tsv', # noqa: E501
|
| 595 |
+
'GMAI_mm_bench_TEST_part_9': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_9.tsv', # noqa: E501
|
| 596 |
+
'GMAI_mm_bench_TEST_part_10': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_10.tsv', # noqa: E501
|
| 597 |
+
'GMAI_mm_bench_TEST_part_11': 'https://huggingface.co/datasets/OpenGVLab/GMAI-MMBench/resolve/main/GMAI_mm_bench_TEST_part_11.tsv', # noqa: E501
|
| 598 |
+
}
|
| 599 |
+
|
| 600 |
+
DATASET_MD5 = {
|
| 601 |
+
'GMAI-MMBench_VAL': '254bd581627866f1c499d3d6b4422324',
|
| 602 |
+
'GMAI_mm_bench_TEST_part_1': '900d735231230a63f4ed45665c078ef4',
|
| 603 |
+
'GMAI_mm_bench_TEST_part_2': '1b27ab621386945d7e4a765ad2d22b0e',
|
| 604 |
+
'GMAI_mm_bench_TEST_part_3': '44bdc2b6267dd505d529b8cad06f0fb2',
|
| 605 |
+
'GMAI_mm_bench_TEST_part_4': '5a04a04fcac9f1466709f242fdb80acb',
|
| 606 |
+
'GMAI_mm_bench_TEST_part_5': 'c70baf8909eda9af0ddeab275c721336',
|
| 607 |
+
'GMAI_mm_bench_TEST_part_6': '825abc39596b644dead9350d0cfa3b96',
|
| 608 |
+
'GMAI_mm_bench_TEST_part_7': 'defb8aed2fb77365a76b6b9abd6a2701',
|
| 609 |
+
'GMAI_mm_bench_TEST_part_8': 'ff490d60b85f2bb0abb67a435b298c65',
|
| 610 |
+
'GMAI_mm_bench_TEST_part_9': 'ff67c86f40da93b09139ac1d1ba5dc6b',
|
| 611 |
+
'GMAI_mm_bench_TEST_part_10': '3dae94627b9ac0fe00180d4780fbf6dc',
|
| 612 |
+
'GMAI_mm_bench_TEST_part_11': 'd08dc813f0eb6bbab63cae2a9d113c4b',
|
| 613 |
+
}
|
| 614 |
+
|
| 615 |
+
@classmethod
|
| 616 |
+
def supported_datasets(cls):
|
| 617 |
+
return ['GMAI-MMBench_VAL', 'GMAI-MMBench_TEST']
|
| 618 |
+
|
| 619 |
+
def load_data(self, dataset):
|
| 620 |
+
if dataset == 'GMAI-MMBench_VAL':
|
| 621 |
+
data_path = osp.join(LMUDataRoot(), f'{dataset}.tsv')
|
| 622 |
+
if file_size(data_path, 'GB') > 1:
|
| 623 |
+
local_path = data_path.replace('.tsv', '_local.tsv')
|
| 624 |
+
if not osp.exists(local_path) or os.environ.get('FORCE_LOCAL'):
|
| 625 |
+
from ..tools import LOCALIZE
|
| 626 |
+
LOCALIZE(data_path, local_path)
|
| 627 |
+
data_path = local_path
|
| 628 |
+
return load(data_path)
|
| 629 |
+
elif dataset == 'GMAI-MMBench_TEST':
|
| 630 |
+
dfs = []
|
| 631 |
+
for part_num in range(1, 12):
|
| 632 |
+
part_name = f'GMAI_mm_bench_TEST_part_{part_num}'
|
| 633 |
+
url = self.DATASET_URL[part_name]
|
| 634 |
+
file_md5 = self.DATASET_MD5.get(part_name)
|
| 635 |
+
tsv_path = osp.join(LMUDataRoot(), f'{part_name}.tsv')
|
| 636 |
+
if not osp.exists(tsv_path) or (file_md5 and md5(tsv_path) != file_md5):
|
| 637 |
+
download_file(url, filename=tsv_path)
|
| 638 |
+
local_path = tsv_path.replace('.tsv', '_local.tsv')
|
| 639 |
+
if not osp.exists(local_path) or os.environ.get('FORCE_LOCAL'):
|
| 640 |
+
from ..tools import LOCALIZE
|
| 641 |
+
LOCALIZE(tsv_path, local_path)
|
| 642 |
+
tsv_path = local_path
|
| 643 |
+
# 加载数据
|
| 644 |
+
df = load(tsv_path)
|
| 645 |
+
dfs.append(df)
|
| 646 |
+
# 合并所有数据
|
| 647 |
+
data = pd.concat(dfs, ignore_index=True)
|
| 648 |
+
return data
|
| 649 |
+
else:
|
| 650 |
+
raise ValueError(f"未知的数据集:{dataset}")
|
| 651 |
+
|
| 652 |
+
def report_acc_by_groups(self, df, group_column):
|
| 653 |
+
res = defaultdict(list)
|
| 654 |
+
|
| 655 |
+
# Check for the 'split' column
|
| 656 |
+
if 'split' in df:
|
| 657 |
+
splits = list(set(df['split']))
|
| 658 |
+
res['split'] = splits
|
| 659 |
+
else:
|
| 660 |
+
df['split'] = ['none'] * len(df)
|
| 661 |
+
res['split'] = ['none']
|
| 662 |
+
|
| 663 |
+
res['Overall'] = [np.mean(df[df['split'] == sp]['hit']) for sp in res['split']]
|
| 664 |
+
|
| 665 |
+
if group_column not in df:
|
| 666 |
+
raise ValueError(f"Column '{group_column}' not found in dataframe.") # noqa: E713
|
| 667 |
+
|
| 668 |
+
abilities = list(set(df[group_column]))
|
| 669 |
+
abilities = ['None' if isinstance(ab, float) and pd.isna(ab) else ab for ab in abilities]
|
| 670 |
+
abilities.sort()
|
| 671 |
+
|
| 672 |
+
for ab in abilities:
|
| 673 |
+
ab_name = ab
|
| 674 |
+
sub_df = df[df[group_column] == ab]
|
| 675 |
+
res[ab_name] = [np.mean(sub_df[sub_df['split'] == sp]['hit']) for sp in res['split']]
|
| 676 |
+
|
| 677 |
+
return pd.DataFrame(res)
|
| 678 |
+
|
| 679 |
+
def evaluate(self, eval_file, **judge_kwargs):
|
| 680 |
+
from .utils.multiple_choice import report_acc, mcq_vanilla_eval
|
| 681 |
+
nproc = judge_kwargs.pop('nproc', 4)
|
| 682 |
+
|
| 683 |
+
suffix = eval_file.split('.')[-1]
|
| 684 |
+
model = judge_kwargs.get('model', 'exact_matching')
|
| 685 |
+
assert model in ['chatgpt-0125', 'exact_matching', 'gpt-4-0125']
|
| 686 |
+
name_str_map = {'chatgpt-0125': 'openai', 'gpt-4-0125': 'gpt4'}
|
| 687 |
+
name_str = name_str_map[model] if model in name_str_map else model
|
| 688 |
+
|
| 689 |
+
if model == 'exact_matching':
|
| 690 |
+
model = None
|
| 691 |
+
elif gpt_key_set():
|
| 692 |
+
model = build_judge(**judge_kwargs)
|
| 693 |
+
if not model.working():
|
| 694 |
+
warnings.warn('OPENAI API is not working properly, will use exact matching for evaluation')
|
| 695 |
+
warnings.warn(DEBUG_MESSAGE)
|
| 696 |
+
model = None
|
| 697 |
+
else:
|
| 698 |
+
warnings.warn('OPENAI_API_KEY is not set properly, will use exact matching for evaluation')
|
| 699 |
+
model = None
|
| 700 |
+
|
| 701 |
+
result_file = eval_file.replace(f'.{suffix}', f'_{name_str}_result.pkl')
|
| 702 |
+
|
| 703 |
+
data = load(eval_file)
|
| 704 |
+
data = data.sort_values(by='index')
|
| 705 |
+
data['prediction'] = [str(x) for x in data['prediction']]
|
| 706 |
+
# If not choice label, then use lower case
|
| 707 |
+
for k in data.keys():
|
| 708 |
+
data[k.lower() if k not in list(string.ascii_uppercase) else k] = data.pop(k)
|
| 709 |
+
|
| 710 |
+
meta = self.data
|
| 711 |
+
meta_q_map = {x: y for x, y in zip(meta['index'], meta['question'])}
|
| 712 |
+
data_map = {x: y for x, y in zip(data['index'], data['question'])}
|
| 713 |
+
for k in data_map:
|
| 714 |
+
assert k in meta_q_map, (
|
| 715 |
+
f'eval_file should be the same as or a subset of dataset {self.dataset_name}'
|
| 716 |
+
)
|
| 717 |
+
|
| 718 |
+
data = mcq_vanilla_eval(model, data, meta, nproc, result_file, self.dataset_name)
|
| 719 |
+
|
| 720 |
+
# load split
|
| 721 |
+
dump(data, eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 722 |
+
data = load(eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 723 |
+
|
| 724 |
+
acc = report_acc(data)
|
| 725 |
+
|
| 726 |
+
for group_col in ['clinical vqa task', 'department', 'perceptual granularity']:
|
| 727 |
+
acc_grouped = self.report_acc_by_groups(data, group_col)
|
| 728 |
+
score_file_grouped = eval_file.replace(f'.{suffix}', f'_{group_col}_acc.csv')
|
| 729 |
+
dump(acc_grouped, score_file_grouped)
|
| 730 |
+
|
| 731 |
+
return acc
|
| 732 |
+
|
| 733 |
+
|
| 734 |
+
class MMERealWorld(ImageMCQDataset):
|
| 735 |
+
|
| 736 |
+
TYPE = 'MMERealWorld'
|
| 737 |
+
|
| 738 |
+
DATASET_MD5 = {
|
| 739 |
+
'MME-RealWorld': '271c33ec814c39533c467ec6fb8a6f36',
|
| 740 |
+
'MME-RealWorld-Lite': '4c17057d7d3b6c4a0d4397c3dae0881c',
|
| 741 |
+
'MME-RealWorld-CN': 'daaa763d52a760a38606d5dedb3fe444',
|
| 742 |
+
}
|
| 743 |
+
SYS = {
|
| 744 |
+
'MME-RealWorld': (
|
| 745 |
+
'Select the best answer to the above multiple-choice question based on the image. '
|
| 746 |
+
'Respond with only the letter (A, B, C, D, or E) of the correct option. \n'
|
| 747 |
+
'The best answer is:'
|
| 748 |
+
),
|
| 749 |
+
'MME-RealWorld-Lite': (
|
| 750 |
+
'Select the best answer to the above multiple-choice question based on the image. '
|
| 751 |
+
'Respond with only the letter (A, B, C, D, or E) of the correct option. \n'
|
| 752 |
+
'The best answer is:'
|
| 753 |
+
),
|
| 754 |
+
'MME-RealWorld-CN': (
|
| 755 |
+
'根据图像选择上述多项选择题的最佳答案。只需回答正确选项的字母(A, B, C, D 或 E)。\n'
|
| 756 |
+
'最佳答案为:'
|
| 757 |
+
),
|
| 758 |
+
}
|
| 759 |
+
|
| 760 |
+
@classmethod
|
| 761 |
+
def supported_datasets(cls):
|
| 762 |
+
return ['MME-RealWorld', 'MME-RealWorld-CN', 'MME-RealWorld-Lite',]
|
| 763 |
+
|
| 764 |
+
def load_data(
|
| 765 |
+
self, dataset="MME-RealWorld", repo_id="yifanzhang114/MME-RealWorld-Base64"
|
| 766 |
+
):
|
| 767 |
+
|
| 768 |
+
def check_integrity(pth):
|
| 769 |
+
data_file = osp.join(pth, f"{dataset}.tsv")
|
| 770 |
+
|
| 771 |
+
if not os.path.exists(data_file):
|
| 772 |
+
return False
|
| 773 |
+
|
| 774 |
+
if md5(data_file) != self.DATASET_MD5[dataset]:
|
| 775 |
+
return False
|
| 776 |
+
return True
|
| 777 |
+
|
| 778 |
+
def generate_tsv(pth):
|
| 779 |
+
tsv_file = os.path.join(pth, f"{dataset}.tsv")
|
| 780 |
+
|
| 781 |
+
if os.path.exists(tsv_file):
|
| 782 |
+
print(f"{tsv_file} already exists.")
|
| 783 |
+
return
|
| 784 |
+
|
| 785 |
+
json_dir = os.path.join(pth, dataset)
|
| 786 |
+
json_files = [f for f in os.listdir(json_dir) if f.endswith(".json")]
|
| 787 |
+
|
| 788 |
+
data_list = []
|
| 789 |
+
for json_file in json_files:
|
| 790 |
+
with open(os.path.join(json_dir, json_file), "r") as f:
|
| 791 |
+
data = json.load(f)
|
| 792 |
+
for item in tqdm(data):
|
| 793 |
+
choice_prompt = (
|
| 794 |
+
"The choices are listed below:\n"
|
| 795 |
+
if dataset in ["MME-RealWorld", "MME-RealWorld-Lite"]
|
| 796 |
+
else "选项如下所示:\n"
|
| 797 |
+
)
|
| 798 |
+
data_list.append(
|
| 799 |
+
{
|
| 800 |
+
"index": item["index"],
|
| 801 |
+
"image": item["image"],
|
| 802 |
+
"question": item["question"],
|
| 803 |
+
"multi-choice options": choice_prompt
|
| 804 |
+
+ "\n".join(item["multi-choice options"]),
|
| 805 |
+
"A": item["multi-choice options"][0][4:],
|
| 806 |
+
"B": item["multi-choice options"][1][4:],
|
| 807 |
+
"C": item["multi-choice options"][2][4:],
|
| 808 |
+
"D": item["multi-choice options"][3][4:],
|
| 809 |
+
"E": item["multi-choice options"][4][4:],
|
| 810 |
+
"answer": item["answer"],
|
| 811 |
+
"category": item["category"],
|
| 812 |
+
"l2-category": item["l2-category"],
|
| 813 |
+
}
|
| 814 |
+
)
|
| 815 |
+
df = pd.DataFrame(data_list)
|
| 816 |
+
df.to_csv(tsv_file, sep="\t", index=False)
|
| 817 |
+
print(f"TSV file saved to {tsv_file}")
|
| 818 |
+
|
| 819 |
+
# Check if dataset is cached and has integrity
|
| 820 |
+
if dataset == "MME-RealWorld-Lite":
|
| 821 |
+
url = 'https://huggingface.co/datasets/yifanzhang114/MME-RealWorld-Base64/resolve/main/mme_realworld_lite.tsv' # noqa: E501
|
| 822 |
+
file_md5 = (
|
| 823 |
+
self.DATASET_MD5[dataset] if dataset in self.DATASET_MD5 else None
|
| 824 |
+
)
|
| 825 |
+
datas = self.prepare_tsv(url, file_md5)
|
| 826 |
+
choice_prompt = "The choices are listed below:\n"
|
| 827 |
+
for index, item in datas.iterrows():
|
| 828 |
+
options = eval(item["multi-choice options"])
|
| 829 |
+
datas.loc[index, "multi-choice options"] = choice_prompt + "\n".join(
|
| 830 |
+
options
|
| 831 |
+
)
|
| 832 |
+
datas.loc[index, "A"] = options[0][4:]
|
| 833 |
+
datas.loc[index, "B"] = options[1][4:]
|
| 834 |
+
datas.loc[index, "C"] = options[2][4:]
|
| 835 |
+
datas.loc[index, "D"] = options[3][4:]
|
| 836 |
+
datas.loc[index, "E"] = options[4][4:]
|
| 837 |
+
return datas
|
| 838 |
+
|
| 839 |
+
update_flag = False
|
| 840 |
+
cache_path = get_cache_path(repo_id)
|
| 841 |
+
if cache_path is not None and check_integrity(cache_path):
|
| 842 |
+
dataset_path = cache_path
|
| 843 |
+
print(f"Using cached dataset from {cache_path}")
|
| 844 |
+
else:
|
| 845 |
+
from huggingface_hub import snapshot_download
|
| 846 |
+
|
| 847 |
+
# Download or find the dataset path
|
| 848 |
+
dataset_path = snapshot_download(repo_id=repo_id, repo_type="dataset")
|
| 849 |
+
generate_tsv(dataset_path)
|
| 850 |
+
update_flag = True
|
| 851 |
+
|
| 852 |
+
data_path = os.path.join(dataset_path, f"{dataset}.tsv")
|
| 853 |
+
if file_size(data_path, "GB") > 1:
|
| 854 |
+
local_path = data_path.replace(".tsv", "_local.tsv")
|
| 855 |
+
if (
|
| 856 |
+
not osp.exists(local_path)
|
| 857 |
+
or os.environ.get("FORCE_LOCAL", None)
|
| 858 |
+
or update_flag
|
| 859 |
+
):
|
| 860 |
+
from vlmeval.tools import LOCALIZE
|
| 861 |
+
|
| 862 |
+
LOCALIZE(data_path, local_path)
|
| 863 |
+
data_path = local_path
|
| 864 |
+
return load(data_path)
|
| 865 |
+
|
| 866 |
+
def post_build(self, dataset):
|
| 867 |
+
self.TYPE = 'MMERealWorld'
|
| 868 |
+
|
| 869 |
+
# Given one data record, return the built prompt (a multi-modal message), can override
|
| 870 |
+
def build_prompt(self, line):
|
| 871 |
+
if isinstance(line, int):
|
| 872 |
+
line = self.data.iloc[line]
|
| 873 |
+
|
| 874 |
+
if self.meta_only:
|
| 875 |
+
tgt_path = toliststr(line['image_path'])
|
| 876 |
+
else:
|
| 877 |
+
tgt_path = self.dump_image(line)
|
| 878 |
+
|
| 879 |
+
question = line['question']
|
| 880 |
+
|
| 881 |
+
choice_prompt = line['multi-choice options'] + '\n'
|
| 882 |
+
question += ' ' + choice_prompt + self.SYS[self.dataset_name]
|
| 883 |
+
|
| 884 |
+
msgs = []
|
| 885 |
+
if isinstance(tgt_path, list):
|
| 886 |
+
msgs.extend([dict(type='image', value=p) for p in tgt_path])
|
| 887 |
+
else:
|
| 888 |
+
msgs = [dict(type='image', value=tgt_path)]
|
| 889 |
+
msgs.append(dict(type='text', value=question))
|
| 890 |
+
return msgs
|
| 891 |
+
|
| 892 |
+
# It returns a dictionary
|
| 893 |
+
@classmethod
|
| 894 |
+
def evaluate(self, eval_file, **judge_kwargs):
|
| 895 |
+
from .utils.multiple_choice import extract_characters_regex, get_dimension_rating
|
| 896 |
+
assert eval_file.endswith('.xlsx'), 'data file should be an xlsx file'
|
| 897 |
+
FAIL_MSG = 'Failed to obtain answer via API.'
|
| 898 |
+
tmp_file = eval_file.replace('.xlsx', '_tmp.pkl')
|
| 899 |
+
tgt_file = eval_file.replace('.xlsx', '_rating.json')
|
| 900 |
+
score_file = eval_file.replace('.xlsx', '_score.xlsx')
|
| 901 |
+
|
| 902 |
+
if not osp.exists(score_file):
|
| 903 |
+
|
| 904 |
+
res = {} if not osp.exists(tmp_file) else load(tmp_file)
|
| 905 |
+
res = {k: v for k, v in res.items() if FAIL_MSG not in v}
|
| 906 |
+
|
| 907 |
+
data = load(eval_file)
|
| 908 |
+
cnt_rejected = 0
|
| 909 |
+
data_un = data[~pd.isna(data['prediction'])]
|
| 910 |
+
|
| 911 |
+
for idx in data['index']:
|
| 912 |
+
ans = data.loc[data['index'] == idx, 'answer'].values[0]
|
| 913 |
+
pred = data.loc[data['index'] == idx, 'prediction'].values[0]
|
| 914 |
+
|
| 915 |
+
extract_pred = extract_characters_regex(pred)
|
| 916 |
+
if extract_pred == '':
|
| 917 |
+
cnt_rejected += 1
|
| 918 |
+
data.loc[data['index'] == idx, 'score'] = 0
|
| 919 |
+
else:
|
| 920 |
+
data.loc[data['index'] == idx, 'score'] = int(extract_pred == ans)
|
| 921 |
+
|
| 922 |
+
print(
|
| 923 |
+
f'Among {len(data)} questions, failed to obtain prediction for {len(data) - len(data_un)} questions, '
|
| 924 |
+
f'failed to obtain the score for another {cnt_rejected} questions. '
|
| 925 |
+
f'Those questions will be counted as 0 score in ALL rating.'
|
| 926 |
+
)
|
| 927 |
+
|
| 928 |
+
dump(data, score_file)
|
| 929 |
+
|
| 930 |
+
rating = get_dimension_rating(score_file)
|
| 931 |
+
dump(rating, tgt_file)
|
| 932 |
+
return rating
|
| 933 |
+
|
| 934 |
+
|
| 935 |
+
class HRBenchDataset(ImageMCQDataset):
|
| 936 |
+
|
| 937 |
+
DATASET_URL = {
|
| 938 |
+
'HRBench4K': 'https://huggingface.co/datasets/DreamMr/HR-Bench/resolve/main/hr_bench_4k.tsv',
|
| 939 |
+
'HRBench8K': 'https://huggingface.co/datasets/DreamMr/HR-Bench/resolve/main/hr_bench_8k.tsv',
|
| 940 |
+
}
|
| 941 |
+
|
| 942 |
+
DATASET_MD5 = {
|
| 943 |
+
'HRBench4K': 'f6b041b03d49543494b8a56d2e35be65',
|
| 944 |
+
'HRBench8K': '274c9c7f89329b804a4723178a00219c',
|
| 945 |
+
}
|
| 946 |
+
|
| 947 |
+
def evaluate(self, eval_file, **judge_kwargs):
|
| 948 |
+
assert os.path.exists(eval_file), '{} does not exist!'.format(eval_file)
|
| 949 |
+
from .utils.multiple_choice import mcq_vanilla_eval
|
| 950 |
+
from .utils.hrbench import report_acc_hrbench
|
| 951 |
+
nproc = judge_kwargs.pop('nproc', 4)
|
| 952 |
+
|
| 953 |
+
suffix = eval_file.split('.')[-1]
|
| 954 |
+
model = judge_kwargs.get('model', 'extract_matching')
|
| 955 |
+
assert model in ['chatgpt-0125', 'exact_matching', 'gpt-4-0125']
|
| 956 |
+
name_str_map = {'chatgpt-0125': 'openai', 'gpt-4-0125': 'gpt4'}
|
| 957 |
+
name_str = name_str_map[model] if model in name_str_map else model
|
| 958 |
+
|
| 959 |
+
if model == 'exact_matching':
|
| 960 |
+
model = None
|
| 961 |
+
elif gpt_key_set():
|
| 962 |
+
model = build_judge(**judge_kwargs)
|
| 963 |
+
if not model.working():
|
| 964 |
+
warnings.warn('OPENAI API is not working properly, will use exact matching for evaluation')
|
| 965 |
+
warnings.warn(DEBUG_MESSAGE)
|
| 966 |
+
model = None
|
| 967 |
+
else:
|
| 968 |
+
warnings.warn('OPENAI_API_KEY is not set properly, will use exact matching for evaluation')
|
| 969 |
+
model = None
|
| 970 |
+
|
| 971 |
+
result_file = eval_file.replace(f'.{suffix}', f'_{name_str}_result.pkl')
|
| 972 |
+
|
| 973 |
+
data = load(eval_file)
|
| 974 |
+
data = data.sort_values(by='index')
|
| 975 |
+
data['prediction'] = [str(x) for x in data['prediction']]
|
| 976 |
+
# If not choice label, then use lower case
|
| 977 |
+
for k in data.keys():
|
| 978 |
+
data[k.lower() if k not in list(string.ascii_uppercase) else k] = data.pop(k)
|
| 979 |
+
|
| 980 |
+
meta = self.data
|
| 981 |
+
meta_q_map = {x: y for x, y in zip(meta['index'], meta['question'])}
|
| 982 |
+
data_map = {x: y for x, y in zip(data['index'], data['question'])}
|
| 983 |
+
for k in data_map:
|
| 984 |
+
assert k in meta_q_map, (
|
| 985 |
+
f'eval_file should be the same as or a subset of dataset {self.dataset_name}'
|
| 986 |
+
)
|
| 987 |
+
|
| 988 |
+
score_file = eval_file.replace(f'.{suffix}', '_acc.csv')
|
| 989 |
+
|
| 990 |
+
if osp.exists(score_file):
|
| 991 |
+
acc = load(score_file)
|
| 992 |
+
return acc
|
| 993 |
+
data = mcq_vanilla_eval(model, data, meta, nproc, result_file, self.dataset_name)
|
| 994 |
+
dump(data, eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 995 |
+
data = load(eval_file.replace(f'.{suffix}', f'_{name_str}_result.{suffix}'))
|
| 996 |
+
|
| 997 |
+
acc = report_acc_hrbench(data)
|
| 998 |
+
|
| 999 |
+
score_file = eval_file.replace(f'.{suffix}', '_acc.csv')
|
| 1000 |
+
dump(acc, score_file)
|
| 1001 |
+
|
| 1002 |
+
return acc
|
| 1003 |
+
|
| 1004 |
+
|
| 1005 |
+
class CustomMCQDataset(ImageMCQDataset):
|
| 1006 |
+
|
| 1007 |
+
def load_data(self, dataset):
|
| 1008 |
+
data_path = osp.join(LMUDataRoot(), f'{dataset}.tsv')
|
| 1009 |
+
|
| 1010 |
+
if file_size(data_path, 'GB') > 1:
|
| 1011 |
+
local_path = data_path.replace('.tsv', '_local.tsv')
|
| 1012 |
+
if not osp.exists(local_path) or os.environ.get('FORCE_LOCAL', None):
|
| 1013 |
+
from ..tools import LOCALIZE
|
| 1014 |
+
LOCALIZE(data_path, local_path)
|
| 1015 |
+
data_path = local_path
|
| 1016 |
+
return load(data_path)
|
| 1017 |
+
|
| 1018 |
+
|
| 1019 |
+
class NaturalBenchDataset(ImageMCQDataset):
|
| 1020 |
+
|
| 1021 |
+
DATASET_URL = {
|
| 1022 |
+
'NaturalBenchDataset': (
|
| 1023 |
+
'https://huggingface.co/datasets/BaiqiL/'
|
| 1024 |
+
'NaturalBench/resolve/main/NaturalBenchDataset.tsv'
|
| 1025 |
+
),
|
| 1026 |
+
}
|
| 1027 |
+
DATASET_MD5 = {
|
| 1028 |
+
'NaturalBenchDataset':'dbe25b044bc35696426381e9ba4fe930',
|
| 1029 |
+
}
|
| 1030 |
+
|
| 1031 |
+
def build_prompt(self, line):
|
| 1032 |
+
SUFFIX_FOR_VQA = {
|
| 1033 |
+
"yes_no": "Please answer Yes or No.",
|
| 1034 |
+
"multiple_choice": "Please output the letter corresponding to the correct option."
|
| 1035 |
+
}
|
| 1036 |
+
if isinstance(line, int):
|
| 1037 |
+
line = self.data.iloc[line]
|
| 1038 |
+
|
| 1039 |
+
if self.meta_only:
|
| 1040 |
+
tgt_path = toliststr(line['image_path'])
|
| 1041 |
+
else:
|
| 1042 |
+
tgt_path = self.dump_image(line)
|
| 1043 |
+
|
| 1044 |
+
question = line['question']
|
| 1045 |
+
prompt = f'{question} {SUFFIX_FOR_VQA[line["type"]]}'
|
| 1046 |
+
msgs = []
|
| 1047 |
+
if isinstance(tgt_path, list):
|
| 1048 |
+
msgs.extend([dict(type='image', value=p) for p in tgt_path])
|
| 1049 |
+
else:
|
| 1050 |
+
msgs = [dict(type='image', value=tgt_path)]
|
| 1051 |
+
msgs.append(dict(type='text', value=prompt))
|
| 1052 |
+
|
| 1053 |
+
return msgs
|
| 1054 |
+
|
| 1055 |
+
def evaluate(self, eval_file, **judge_kwargs):
|
| 1056 |
+
from .utils.naturalbench import extract_answer, get_scores
|
| 1057 |
+
|
| 1058 |
+
data = load(eval_file)
|
| 1059 |
+
data = data.sort_values(by='index')
|
| 1060 |
+
predictions = [str(x) for x in data['prediction']]
|
| 1061 |
+
answers = [str(x) for x in data['answer']]
|
| 1062 |
+
indexs = [str(x) for x in data['index']]
|
| 1063 |
+
meta = self.data
|
| 1064 |
+
types = [str(x) for x in meta['type']]
|
| 1065 |
+
results = {}
|
| 1066 |
+
assert len(predictions) == len(answers) == len(indexs) == len(types) == (1900 * 4)
|
| 1067 |
+
number_answered_samples = len(predictions) // 4
|
| 1068 |
+
for i in range(number_answered_samples):
|
| 1069 |
+
results[i] = {
|
| 1070 |
+
"q0_i0": extract_answer(predictions[i * 4], types[i * 4]),
|
| 1071 |
+
"q0_i1": extract_answer(predictions[i * 4 + 1], types[i * 4 + 1]),
|
| 1072 |
+
"q1_i0": extract_answer(predictions[i * 4 + 2], types[i * 4 + 2]),
|
| 1073 |
+
"q1_i1": extract_answer(predictions[i * 4 + 3], types[i * 4 + 3])
|
| 1074 |
+
}
|
| 1075 |
+
|
| 1076 |
+
scores = get_scores(results)
|
| 1077 |
+
print(scores)
|
| 1078 |
+
score_file = 'NaturalBench_acc.csv'
|
| 1079 |
+
df = pd.DataFrame(list(scores.items()), columns=['Metric', 'Score'])
|
| 1080 |
+
dump(df, score_file)
|
| 1081 |
+
|
| 1082 |
+
return scores
|